.. -*- mode: rst; coding: utf-8 -*-

.. _mdanalysis_psa_partial:

===========================
 mdanalysis_psa_partial.py
===========================

The :file:`rp/mdanalysis_psa_partial.py` script performs the path
similarity analysis on a subset of trajectories and computes a
sub-block of the distance matrix. All MDAnalysis specific-code is
confined to this file.

.. literalinclude:: rp/mdanalysis_psa_partial.py
   :language: python
   :linenos: