============ Clustering ============ .. automodule:: MDAnalysis.analysis.encore.clustering.cluster :members: .. automodule:: MDAnalysis.analysis.encore.clustering.ClusterCollection :members: .. automodule:: MDAnalysis.analysis.encore.clustering.ClusteringMethod :members: Clustering algorithms ===================== The following clustering algorithms are always available: .. automodule:: MDAnalysis.analysis.encore.clustering.affinityprop :members: